Knowing family in N.E. where it rains, and snows quite a bit and remains damp for most of the year (ponds) the construction type doesn't seem to be deficient in that sense. They are however, not the same construction as older house from 1800s, early 1900s --but those too have their issues with very irregular construction. Things which would not be allowed today (narrow staircases, irregular architecture and of course, no accommodation for modern plumbing or electricity).
I've pondered where you even start today if you want to build an 1800's style "built to last" home that ignores cost, and focuses both on longevity and ease of maintenance.
With some modern design concepts (e.g. leaving plenty of plenum for unanticipated future cabling/plumbing needs) I think you could come up with a very pleasant place to live, just at probably quadruple the price.
Is anyone building stuff like this today? Or would this have to be some extremely custom stuff you need to research and act as a contractor managing a bunch of subcontractors?