The things you are complaining about are things that are handled by higher level human-scale protocols. They can and are layered on top of the existing low-level hardware-scale protocols.
You might think that those layers suck because they are layered on top of low-level protocols. If we just baked everything in from the start, then everything would work more cleanly. That is almost never the case. Those layers usually suck because it is just really hard to do human-level context-dependent whatever. To the extent that they suck for outside reasons, it is usually because the low-level protocols expose a abstraction that mismatches your desired functionality and is too high-level, not one that is too low-level. A lower-level abstraction would give you more flexibility to implement the high-level abstraction with fewer non-essential mismatches.
Baking in these high-level human-scale abstractions down at the very heart of things is how we get complex horrible nonsense like leap seconds which we then need to add even more horrible nonsense like leap second smearing on top to attempt to poorly undo it. It is how you get Microsoft Excel rewriting numbers to dates and spell correcting gene names with no way to turn it off because they baked it in all the way at the bottom.
You might think that those layers suck because they are layered on top of low-level protocols. If we just baked everything in from the start, then everything would work more cleanly. That is almost never the case. Those layers usually suck because it is just really hard to do human-level context-dependent whatever. To the extent that they suck for outside reasons, it is usually because the low-level protocols expose a abstraction that mismatches your desired functionality and is too high-level, not one that is too low-level. A lower-level abstraction would give you more flexibility to implement the high-level abstraction with fewer non-essential mismatches.
Baking in these high-level human-scale abstractions down at the very heart of things is how we get complex horrible nonsense like leap seconds which we then need to add even more horrible nonsense like leap second smearing on top to attempt to poorly undo it. It is how you get Microsoft Excel rewriting numbers to dates and spell correcting gene names with no way to turn it off because they baked it in all the way at the bottom.