The threads were neatly partitioned because they were all based on an initial source of information (the source article), but it was then merged into one mega-thread contained conflicting sources and thus it makes it confusing since all the comments which were based on different sources are now intermingled.
Also, auto-hiding my original comment? All I am trying to do is give some personal feedback in how you guys can improve your website and your response is to try and censor me? Let the other hacker news readers decide by voting considering that that is literally one of your companies essential startup advice: "For any company, software or otherwise, this means that in order to make something people want: you must launch something, talk to your users to see if it serves their needs, and then take their feedback and iterate" [0].
Not to disagree with you, because I understand your point of view, but for me the hiding doesn't come across as censoring so much as marking as "off topic, meta discussion".
People who care about that kind of thing click through and read it, otherwise it lets people skip over to read comments about the article.